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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21777741_21778758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21777741 - 21778758

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGGCG

5'SS Class:

major

3'SS Sequence:

TTCCCCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TGCATCTCAACG

Flanking Amino Acid:

SRHVEQCLAKREGSCMTEDD

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

56.4

39.8

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

77.3

0.61

0.9

72.5

32.2

Minor 5ss

27.5

-2.6

3.7

47.1

Minor BPS

52.4

-0

1.7

56.87

44.3

Associated Gene:

Gene:

RNF220

Ensembl Gene ID:

ENSAPLG00000010257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010720

21639536 - 21821913

182378

ENSAPLT00000040448

21644291 - 21799530

155240

ENSAPLT00000031958

21644291 - 21814491

170201

ENSAPLT00000030852

21773997 - 21821913

47917