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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21814153_21815419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21814153 - 21815419

Intron Length:

1267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GTGGAAGTAACC

Flanking Amino Acid:

GDRYKCLICMDSYTMPLTSI

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

90.5

0.91

0.6

20.2

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

41.1

-0.6

2.3

53.13

Associated Gene:

Gene:

RNF220

Ensembl Gene ID:

ENSAPLG00000010257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030852

21773997 - 21821913

47917

ENSAPLT00000010720

21639536 - 21821913

182378