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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21815495_21821841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21815495 - 21821841

Intron Length:

6347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGCTC

5'SS Class:

major

3'SS Sequence:

CTGCTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCTGCTCTCACT

Flanking Amino Acid:

HCEECWLRTLGAKKLCPQCN

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

65.6

Major BPS

72.7

0.56

30.1

Major PPT

75.7

0.58

0.9

68.9

37.1

Minor 5ss

-2.3

3.4

38.7

40.9

Minor BPS

48.3

-0

2.2

71.75

45.6

Associated Gene:

Gene:

RNF220

Ensembl Gene ID:

ENSAPLG00000010257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030852

21773997 - 21821913

47917

ENSAPLT00000010720

21639536 - 21821913

182378