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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21829283_21831183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21829283 - 21831183

Intron Length:

1901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAC

U12 Branch Point Sequence:

TCTTTTTGTTCT

Flanking Amino Acid:

AKYSAIYSQKGCTVIRYTAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

-0.1

50.5

30.4

Major PPT

71.6

0.49

0.9

65.9

40.9

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

38.1

-0.8

3.5

67.47

Associated Gene:

Gene:

TMEM53

Ensembl Gene ID:

ENSAPLG00000017485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033851

21826271 - 21831609

5339

ENSAPLT00000033521

21826271 - 21831390

5120