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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21831288_21831551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21831288 - 21831551

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGCACC

5'SS Class:

major

3'SS Sequence:

TTCTGTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

GGGAGCTGACGG

Flanking Amino Acid:

VVELAAGEARGSTAETGCQP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

57.1

42.2

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

80.9

0.7

0.9

72.5

42.4

Minor 5ss

34.3

-1.8

3.1

44.3

43.5

Minor BPS

33.5

-1.3

30.23

40.8

Associated Gene:

Gene:

TMEM53

Ensembl Gene ID:

ENSAPLG00000017485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033851

21826271 - 21831609

5339