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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21840218_21840833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21840218 - 21840833

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CCACCTCTAACT

Flanking Amino Acid:

SQRHSSISLKYFVHTFPFVE

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

72.3

0.55

73.3

28.9

Major PPT

82.4

0.73

0.9

76.8

37.3

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

52.4

0.15

1.7

66.76

43.8

Associated Gene:

Gene:

ARMH1

Ensembl Gene ID:

ENSAPLG00000010051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026659

21834530 - 21855044

20515

ENSAPLT00000010464

21834530 - 21855044

20515

ENSAPLT00000044752

21834530 - 21844849

10320

ENSAPLT00000026804

21834530 - 21845752

11223