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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21851877_21853079_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
21851877 - 21853079

Intron Length:
1203

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTACGTAAA

5'SS Class:
major

3'SS Sequence:
TTCTTTTTTTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAATTAT

U12 Branch Point Sequence:
TAATTATTACTT

Flanking Amino Acid:
DCQPLSITDPIEEHRICVCV

Intron Amino Acid Position:
264

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.7
0.44
1.1
68.4
38.3

Major BPS
76.9
0.67
1
66.3
40.4

Major PPT
91.7
0.94
0.5
92.2
18.3

Minor 5ss
36.2
-1.6
3
47.1
42.6

Minor BPS
51.2
0.12
1.8
70.77
40.2

Associated Gene:

Gene:
KIF2C

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21841892 - 21859365
17474

21841892 - 21859365
17474

21841892 - 21860799
18908