Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_21857991_21858452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21857991 - 21858452

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAACTGA

5'SS Class:

major

3'SS Sequence:

TTTGCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

AATATTTTACCT

Flanking Amino Acid:

MQIDIDDVITIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

64.4

38.3

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

86.6

0.82

0.8

81.1

30.9

Minor 5ss

37.1

-1.5

3.1

47.1

48.3

Minor BPS

55.9

0.26

1.6

71.65

39.4

Associated Gene:

Gene:

KIF2C

Ensembl Gene ID:

ENSAPLG00000009290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045033

21841892 - 21859365

17474

ENSAPLT00000040588

21841892 - 21859365

17474