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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21873427_21873640_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21873427 - 21873640

Intron Length:

214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CTCGCTGCCACC

Flanking Amino Acid:

WISIPLVYTQVVTIAVYSFF

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

36.5

-1

2.4

45.01

44.2

Associated Gene:

Gene:

BEST4

Ensembl Gene ID:

ENSAPLG00000008512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008860

21871993 - 21875199

3207