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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21880949_21881029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21880949 - 21881029

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGTTTTGACCC

Flanking Amino Acid:

APLLLRTQTKAVVVVLFLAL

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

52.5

0.06

1.7

66.12

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037077

21874212 - 21884079

9868

ENSAPLT00000012475

21879940 - 21884623

4684