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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21881343_21881480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21881343 - 21881480

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

ATGCTCACATCC

Flanking Amino Acid:

WLHYFQDWLRGLQATFDRDW

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

67.5

0.39

57.5

43.2

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

41.6

-0.6

1.9

51.31

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037077

21874212 - 21884079

9868

ENSAPLT00000012475

21879940 - 21884623

4684