Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_21888497_21888785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21888497 - 21888785

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

CCGGTCCCAGCG

Flanking Amino Acid:

TTKDSQGKLLSAEALQTMFL

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.7

36.9

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

68.2

0.41

58.5

43.1

Minor 5ss

-2.1

3.6

48.4

47.3

Minor BPS

-1.2

1.9

31.04

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047589

21880826 - 21896587

15762