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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21891476_21896032_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21891476 - 21896032

Intron Length:

4557

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCACAGCCT

5'SS Class:

major

3'SS Sequence:

GCTGTGGGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TCCTAATTAACG

Flanking Amino Acid:

FCGPSWLRAWLASPGIPYGQ

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.3

57.7

40.8

Major BPS

81.9

0.79

0.9

80.1

Major PPT

50.2

0.01

1.2

41.8

47.3

Minor 5ss

20.9

-3.4

4.2

30.3

42.9

Minor BPS

54.8

0.01

1.9

61.42

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047589

21880826 - 21896587

15762