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Intron Name: Anas_platyrhynchos_platyrhynchos_8_21959053_21982859_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21959053 - 21982859

Intron Length:

23807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

CCATGCAAAACT

Flanking Amino Acid:

ELVIKRSILQKHPRMHIRTG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

77.8

33.2

Major BPS

68.7

0.47

0.9

67.9

Major PPT

89.2

0.88

0.7

81.2

36.5

Minor 5ss

49.1

-0.1

2.8

64.7

Minor BPS

43.8

-0.3

2.3

61.11

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011788

21923188 - 21995516

72329