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Intron Name: Anas_platyrhynchos_platyrhynchos_8_22185926_22203657_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
22185926 - 22203657

Intron Length:
17732

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGCGTGTT

5'SS Class:
strong_major

3'SS Sequence:
TTGTATCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTATCAT

U12 Branch Point Sequence:
ATGTTCTTATCA

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.4
0.81
0.9
81.5
32.3

Major BPS
88.2
0.95
0.9
88.3
28.5

Major PPT
83.2
0.75
0.9
77.5
36.5

Minor 5ss
32.1
-2
3.5
48.8
47.4

Minor BPS
66
0.5
1.6
73.13
39

Associated Gene:

Gene:
TESK2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22138509 - 22203792
65284