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Intron Name: Anas_platyrhynchos_platyrhynchos_8_22229049_22229665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22229049 - 22229665

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAAAAC

U12 Branch Point Sequence:

CAGGCTAAAACA

Flanking Amino Acid:

EFRRLQDLPMDDMMEDTPLS

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

49.3

-0

1.1

34.5

Major PPT

81.8

0.71

0.8

72.8

37.5

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

42.8

-0.5

1.9

48.51

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007502

22227299 - 22229710

2412