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Intron Name: Anas_platyrhynchos_platyrhynchos_8_22278320_22279019_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
22278320 - 22279019

Intron Length:
700

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTTCTT

5'SS Class:
major

3'SS Sequence:
GACTCTCTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTATTAT

U12 Branch Point Sequence:
TATTATTGGACT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.2
0.64
1.1
74.8
41.3

Major BPS
72.4
0.56
1.1
63.7
42.3

Major PPT
76.1
0.59
0.9
68.6
37

Minor 5ss
39.2
-1.2
3.3
59.3
45.1

Minor BPS
57.6
0.32
1.7
77.89
38.1

Associated Gene:

Gene:
AKR1A1

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22278261 - 22298088
19828