Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22302052_22302599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22302052 - 22302599

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

ATTACTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

GCTTCATTACTT

Flanking Amino Acid:

VNAFQEAASLLGKKYGETAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

79.2

0.66

0.8

35.9

Minor 5ss

40.4

-1.1

2.9

61.4

42.9

Minor BPS

55.7

0.26

1.9

73.64

43.4

Associated Gene:

Gene:

NASP

Ensembl Gene ID:

ENSAPLG00000004941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005157

22300327 - 22310918

10592