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Intron Name: Anas_platyrhynchos_platyrhynchos_8_22309031_22309437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22309031 - 22309437

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

TGCTGCTTAGCT

Flanking Amino Acid:

VAELALKATLVGTTSGFAQS

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

78.5

30.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

74.8

0.56

79.2

33.2

Minor 5ss

30.7

-2.2

2.5

31.6

35.9

Minor BPS

57.4

0.31

2.1

76.57

45.8

Associated Gene:

Gene:

NASP

Ensembl Gene ID:

ENSAPLG00000004941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005157

22300327 - 22310918

10592