Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22410944_22414673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22410944 - 22414673

Intron Length:

3730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTGTTTTTAAAG

Flanking Amino Acid:

RRGSLASSLSGKQLLPLSNS

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

70.6

41.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

80.8

0.69

82.2

33.3

Minor 5ss

45.6

-0.5

2.9

64.4

Minor BPS

65.9

0.36

1.4

67.73

40.3

Associated Gene:

Gene:

MAST2

Ensembl Gene ID:

ENSAPLG00000006200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037078

22391224 - 22577548

186325

ENSAPLT00000006479

22391224 - 22577548

186325