Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22754289_22754703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22754289 - 22754703

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGAA

5'SS Class:

major

3'SS Sequence:

TACTCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

GGGCTCTTACTC

Flanking Amino Acid:

PVKIEQVVCCRLTPLQAELY

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.4

38.4

Major BPS

69.2

0.48

37.1

Major PPT

79.5

0.66

0.9

76.6

37.1

Minor 5ss

34.2

-1.8

3.6

48.4

Minor BPS

48.4

-0.1

1.6

52.68

Associated Gene:

Gene:

RAD54L

Ensembl Gene ID:

ENSAPLG00000006389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006651

22741727 - 22758498

16772