Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22760899_22761790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22760899 - 22761790

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGCGTATT

5'SS Class:

major

3'SS Sequence:

TCTCCCCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTGCATCTAACA

Flanking Amino Acid:

KSLRLPGNRLGNHRLVALAD

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

79.8

34.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

75.3

0.57

0.7

73.4

24.8

Minor 5ss

35.3

-1.7

3.2

47.5

43.4

Minor BPS

50.2

1.8

66.66

39.4

Associated Gene:

Gene:

LRRC41

Ensembl Gene ID:

ENSAPLG00000006638

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032379

22759900 - 22769336

9437

ENSAPLT00000006902

22759900 - 22769336

9437

ENSAPLT00000044064

22759900 - 22769336

9437