Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22769019_22769119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22769019 - 22769119

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

TCGCTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAG

U12 Branch Point Sequence:

GGTCCTTCAGCT

Flanking Amino Acid:

SMAALEPDVWALPGHLLRGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

64.3

47.1

Major BPS

51.1

0.03

1.6

43.2

Major PPT

74.4

0.55

0.8

31.5

Minor 5ss

31.2

-2.1

3.1

31.4

42.5

Minor BPS

49.1

0.01

1.8

67.79

42.5

Associated Gene:

Gene:

LRRC41

Ensembl Gene ID:

ENSAPLG00000006638

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032379

22759900 - 22769336

9437

ENSAPLT00000044064

22759900 - 22769336

9437