Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22773168_22773333_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22773168 - 22773333

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

AATTTCTCAGCA

Flanking Amino Acid:

TLALLQTGACGHLAANDVSI

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.3

35.8

Major BPS

0.52

1.5

79.6

35.6

Major PPT

0.45

0.9

35.1

Minor 5ss

35.8

-1.6

3.3

43.1

45.5

Minor BPS

54.6

0.14

1.8

67.3

38.7

Associated Gene:

Gene:

NSUN4

Ensembl Gene ID:

ENSAPLG00000007241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028067

22772190 - 22774621

2432

ENSAPLT00000007515

22771925 - 22774621

2697