Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22778246_22778545_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22778246 - 22778545

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCCTGAGA

5'SS Class:

major

3'SS Sequence:

TCCCTGCTTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

GGAAACTCAAGT

Flanking Amino Acid:

PPAQSREVSARPSKEHTFTG

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.2

55.4

41.4

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

57.3

0.17

1.7

68.5

37.4

Minor 5ss

15.7

-4

3.5

23.4

36.5

Minor BPS

43.8

-0.3

57.22

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007645

22778203 - 22785635

7433