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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22810160_22810251_R

Intron Information:

Intron Rank:
14
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
22810160 - 22810251
Intron Length:
92

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTAAGTCAT
5'SS Class:
strong_major
3'SS Sequence:
GTTTTTGCCACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CCAGGAT
U12 Branch Point Sequence:
GTTTTTGCCACA
Flanking Amino Acid:
RDRWDRTLAKAFHGSVGLPV
Intron Amino Acid Position:
703

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.9
0.85
0.9
80.7
33.7
Major BPS
44
-0.3
1.4
37
40.7
Major PPT
78.1
0.63
0.9
72.5
37.8
Minor 5ss
37.6
-1.4
3
50.5
40
Minor BPS
41.7
-0.6
2.4
59.24
41.1

Associated Gene:

Gene:
FAAH
Ensembl Gene ID:
ENSAPLG00000007898
Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000032614
22806418 - 22818988
12571
ENSAPLT00000008231
22806418 - 22818988
12571