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Intron Name: Anas_platyrhynchos_platyrhynchos_8_22855500_22858211_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22855500 - 22858211

Intron Length:
2712

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTGGTGAA

5'SS Class:
major

3'SS Sequence:
CGCTGTTTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCAGCAC

U12 Branch Point Sequence:
TGTCCCTCAGCA

Flanking Amino Acid:
MCQVDVAMQHYGV

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.2
69.7
36.7

Major BPS
46.4
-0.2
1.4
53.6
41.6

Major PPT
77.5
0.62
0.9
68.2
42.3

Minor 5ss
27
-2.6
3.1
31.6
42.8

Minor BPS
56.5
0.2
1.8
70.68
40.9

Associated Gene:

Gene:
DMBX1

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22848686 - 22858795
10110