Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_22891180_22892307_R

Intron Information:

Intron Rank:

130008

Intron Class:

major

Intron Phase:

Intron Coordinates:

22891180 - 22892307

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTGCAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

TTCCCTCCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

79.3

34.3

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

68.3

0.41

41.7

Minor 5ss

34.5

-1.8

3.9

49.2

Minor BPS

46.6

-0.1

1.9

67.9

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017638

22889177 - 22892493

3317