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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23019989_23021415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23019989 - 23021415

Intron Length:

1427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

IETLYQCQGNKNILELIEFF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024709

23010781 - 23032545

21765

ENSAPLT00000008839

23010781 - 23031223

20443