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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23058793_23059719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23058793 - 23059719

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTAAACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCTGTTTAAACT

Flanking Amino Acid:

MTAEMDSKFLVVHEAQCLAN

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

84.4

0.85

34.5

Major PPT

78.1

0.63

0.9

70.8

39.6

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

56.8

0.29

1.8

74.22

43.6

Associated Gene:

Gene:

ATPAF1

Ensembl Gene ID:

ENSAPLG00000009308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009700

23058277 - 23067870

9594