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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23062148_23063937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23062148 - 23063937

Intron Length:

1790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TCCTTCCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GAAACGTGAATT

Flanking Amino Acid:

AKDTVYAVIPAEKFDLMWKR

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

66.5

0.37

26.9

Minor 5ss

40.4

-1.1

2.9

61.4

42.9

Minor BPS

45.6

-0.2

2.1

42.1

Associated Gene:

Gene:

ATPAF1

Ensembl Gene ID:

ENSAPLG00000009308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009700

23058277 - 23067870

9594