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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23063989_23065309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23063989 - 23065309

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGGAT

5'SS Class:

major

3'SS Sequence:

TTGTTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGATTTTTAATG

Flanking Amino Acid:

KDKSAEEIKQIWNQYFSAKD

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

34.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.3

0.82

0.8

81.7

30.4

Minor 5ss

25.5

-2.8

3.5

37.4

47.3

Minor BPS

66.3

0.37

1.3

64.21

38.2

Associated Gene:

Gene:

ATPAF1

Ensembl Gene ID:

ENSAPLG00000009308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009700

23058277 - 23067870

9594