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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23072544_23073857_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
23072544 - 23073857

Intron Length:
1314

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAAGTAA

5'SS Class:
strong_major

3'SS Sequence:
TCAACACGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TTATTTTCAACA

Flanking Amino Acid:
NETHSNKELKEPGTRDSQVL

Intron Amino Acid Position:
384

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.4
0.74
1
74.3
31.9

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
62.3
0.28
1
54.9
40.1

Minor 5ss
35.4
-1.7
3.3
46.2
49.1

Minor BPS
67
0.53
1.5
76.01
35

Associated Gene:

Gene:
EFCAB14

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

23070326 - 23085640
15315