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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2311934_2312887_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2311934 - 2312887

Intron Length:
954

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACTGAC

5'SS Class:
strong_major

3'SS Sequence:
TTTTCTTTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTTAA

U12 Branch Point Sequence:
TTTTCTTTCACA

Flanking Amino Acid:
IVNIAMAAQEGGADGVTATN

Intron Amino Acid Position:
727

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
1.1
75.8
34.3

Major BPS
79.5
0.73
0.9
70
36.9

Major PPT
91.2
0.93
0.6
87.3
23.1

Minor 5ss
38.5
-1.3
3.2
52
45.2

Minor BPS
75.9
0.81
1.6
86.93
31.8

Associated Gene:

Gene:
DPYD

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2220811 - 2563107
342297

2220811 - 2563107
342297

2220811 - 2558897
338087