Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_2313009_2330666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2313009 - 2330666

Intron Length:

17658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

CCTATTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATCTGACCT

Flanking Amino Acid:

ERGMGLACGQDPELVRNICR

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.6

0.42

64.8

40.1

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

58.9

0.36

1.8

81.3

40.1

Associated Gene:

Gene:

DPYD

Ensembl Gene ID:

ENSAPLG00000012045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046083

2220811 - 2558897

338087

ENSAPLT00000012599

2220811 - 2563107

342297