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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_23152900_23154220_R

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
23152900 - 23154220
Intron Length:
1321

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTTTGTTGA
5'SS Class:
major
3'SS Sequence:
ATAACTGTTACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAT
U12 Branch Point Sequence:
TTTTCCTGTACA
Flanking Amino Acid:
DRQLKLLQAQIQRLLEAQAR
Intron Amino Acid Position:
749

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.1
0.59
1.2
68.8
38.4
Major BPS
91.3
1.03
0.7
79.6
35.6
Major PPT
69.5
0.44
1
61.5
43.7
Minor 5ss
42
-0.9
2.4
50.7
45.6
Minor BPS
70.6
0.64
1.8
84.66
34.6

Associated Gene:

Gene:
STIL
Ensembl Gene ID:
ENSAPLG00000010138
Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010565
23146345 - 23164623
18279