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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23172636_23173132_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23172636 - 23173132

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTTATGTG

5'SS Class:

weak_major

3'SS Sequence:

TTGCATGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

GTTTTTTGCATG

Flanking Amino Acid:

MPPAAKKQELKYGYTHLSAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.2

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

76.4

0.59

73.1

41.8

Minor 5ss

38.2

-1.3

3.2

46.4

43.5

Minor BPS

46.6

-0.4

1.9

55.96

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047624

23172606 - 23178207

5602