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Intron Name: Anas_platyrhynchos_platyrhynchos_8_2330751_2333116_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2330751 - 2333116

Intron Length:
2366

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATGGTT

5'SS Class:
strong_major

3'SS Sequence:
GCATATTTCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
TTTTGCATATTT

Flanking Amino Acid:
DWTELSKMAEAVGADALELN

Intron Amino Acid Position:
659

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1
78.8
35.1

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
67
0.38
0.9
60.8
39.8

Minor 5ss
35.2
-1.7
3.8
55.5
48.6

Minor BPS
50.9
0.11
2.2
80.67
41.5

Associated Gene:

Gene:
DPYD

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2220811 - 2558897
338087

2220811 - 2563107
342297