Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_2333186_2356847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2333186 - 2356847

Intron Length:

23662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATATTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTGCCTATATAT

Flanking Amino Acid:

AELKADFPNQILIASIMCSY

Intron Amino Acid Position:

636

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

71.4

0.53

67.3

39.3

Major PPT

82.5

0.73

0.9

40.7

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

46.6

-0.1

1.9

67.67

42.9

Associated Gene:

Gene:

DPYD

Ensembl Gene ID:

ENSAPLG00000012045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012599

2220811 - 2563107

342297

ENSAPLT00000046083

2220811 - 2558897

338087