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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23906108_23906288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23906108 - 23906288

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTGCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TAGTCCTGATTT

Flanking Amino Acid:

PKLVIELMPDGLRGLMIAVM

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

72.9

31.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

82.5

0.73

0.9

77.4

36.9

Minor 5ss

28.5

-2.5

2.8

31.7

36.2

Minor BPS

57.9

0.33

1.7

74.13

42.8

Associated Gene:

Gene:

SLC5A9

Ensembl Gene ID:

ENSAPLG00000007144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007444

23894988 - 23915436

20449