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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23935183_23944307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23935183 - 23944307

Intron Length:

9125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGACT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAACAA

U12 Branch Point Sequence:

ATTTCTTTGTTT

Flanking Amino Acid:

SVLNRSSLRERFNAHCPPPA

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

36.1

Major BPS

49.7

-0

1.1

57.6

37.6

Major PPT

85.9

0.81

0.7

80.4

24.8

Minor 5ss

-1.7

3.2

45.9

Minor BPS

47.5

-0.1

3.4

80.58

35.7

Associated Gene:

Gene:

SPATA6

Ensembl Gene ID:

ENSAPLG00000007793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036683

23928210 - 23965138

36929

ENSAPLT00000008129

23928210 - 23965138

36929