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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23945461_23946413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23945461 - 23946413

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTATT

5'SS Class:

major

3'SS Sequence:

TTTCTTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATACAT

U12 Branch Point Sequence:

TCTTCTGGGATA

Flanking Amino Acid:

TVGAWSKVTHDPSLLGSYKP

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.3

83.5

Major BPS

57.2

0.18

1.2

39.8

Major PPT

91.6

0.94

0.6

84.9

29.9

Minor 5ss

37.2

-1.4

2.9

49.2

40.8

Minor BPS

46.6

-0.2

2.1

Associated Gene:

Gene:

SPATA6

Ensembl Gene ID:

ENSAPLG00000007793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036683

23928210 - 23965138

36929

ENSAPLT00000008129

23928210 - 23965138

36929