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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23947281_23948106_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23947281 - 23948106

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTTTGTATG

5'SS Class:

major

3'SS Sequence:

TTCATTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTAATTCAATT

Flanking Amino Acid:

TDKPPFVVRRFMCR*

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.2

66.5

44.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

83.5

0.75

0.8

76.9

37.2

Minor 5ss

41.4

-1

2.4

44.3

43.2

Minor BPS

56.6

0.28

1.7

78.05

38.3

Associated Gene:

Gene:

SPATA6

Ensembl Gene ID:

ENSAPLG00000007793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024863

23947218 - 23965138

17921