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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23959925_23965090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23959925 - 23965090

Intron Length:

5166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTACTATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTAATG

Flanking Amino Acid:

RCVLRLEIREITCPGVQLKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.61

0.9

69.6

40.3

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

72.1

0.56

1.2

71.21

36.3

Associated Gene:

Gene:

SPATA6

Ensembl Gene ID:

ENSAPLG00000007793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024863

23947218 - 23965138

17921

ENSAPLT00000008129

23928210 - 23965138

36929

ENSAPLT00000036683

23928210 - 23965138

36929