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Intron Name: Anas_platyrhynchos_platyrhynchos_8_23988926_24000625_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23988926 - 24000625

Intron Length:

11700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTCAA

5'SS Class:

major

3'SS Sequence:

CTTCCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CATCTCACAACA

Flanking Amino Acid:

ERPLAPTPKTRKEKEPLFKG

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

65.4

42.2

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

0.58

0.9

72.5

32.1

Minor 5ss

32.6

-2

3.2

40.9

45.4

Minor BPS

47.4

-0.2

1.8

59.23

Associated Gene:

Gene:

AGBL4

Ensembl Gene ID:

ENSAPLG00000007966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027053

23988524 - 24203767

215244

ENSAPLT00000045911

23988524 - 24115540

127017

ENSAPLT00000023859

23988524 - 24256547

268024

ENSAPLT00000043598

23988761 - 24205078

216318

ENSAPLT00000023179

23988524 - 24215523

227000

ENSAPLT00000037283

23988524 - 24205078

216555

ENSAPLT00000036695

23988524 - 24256547

268024

ENSAPLT00000046167

23988524 - 24251074

262551