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Intron Name: Anas_platyrhynchos_platyrhynchos_8_24000723_24074002_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

24000723 - 24074002

Intron Length:

73280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TAAAAACTTACAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCTCCTTAATT

Flanking Amino Acid:

TTAVPYTEEAYMKLGRNVAR

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.8

0.33

1.1

55.1

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

83.2

1.12

1.1

88.65

36.5

Associated Gene:

Gene:

AGBL4

Ensembl Gene ID:

ENSAPLG00000007966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027053

23988524 - 24203767

215244

ENSAPLT00000045911

23988524 - 24115540

127017

ENSAPLT00000023859

23988524 - 24256547

268024

ENSAPLT00000043598

23988761 - 24205078

216318

ENSAPLT00000023179

23988524 - 24215523

227000

ENSAPLT00000037283

23988524 - 24205078

216555

ENSAPLT00000008261

23996693 - 24205078

208386

ENSAPLT00000036695

23988524 - 24256547

268024

ENSAPLT00000046167

23988524 - 24251074

262551