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Intron Name: Anas_platyrhynchos_platyrhynchos_8_24089681_24144083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24089681 - 24144083

Intron Length:

54403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTCCCCTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTCCCCTCAACA

Flanking Amino Acid:

QLIIEMYNNPKINLEFYIDI

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

63.5

42.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

74.1

0.54

0.8

69.6

29.7

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

69.5

0.61

1.6

77.44

39.2

Associated Gene:

Gene:

AGBL4

Ensembl Gene ID:

ENSAPLG00000007966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027053

23988524 - 24203767

215244

ENSAPLT00000046167

23988524 - 24251074

262551

ENSAPLT00000023859

23988524 - 24256547

268024

ENSAPLT00000043598

23988761 - 24205078

216318

ENSAPLT00000023179

23988524 - 24215523

227000

ENSAPLT00000037283

23988524 - 24205078

216555

ENSAPLT00000008261

23996693 - 24205078

208386

ENSAPLT00000036695

23988524 - 24256547

268024