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Intron Name: Anas_platyrhynchos_platyrhynchos_8_24144196_24181474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24144196 - 24181474

Intron Length:

37279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATATAT

U12 Branch Point Sequence:

TTTTCTTGTATG

Flanking Amino Acid:

NPDGVYLGNYRCSLMGFDLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.9

Major BPS

59.1

0.23

1.1

56.7

39.1

Major PPT

0.56

69.5

40.7

Minor 5ss

44.5

-0.6

3.2

64.5

46.9

Minor BPS

55.5

0.03

1.9

67.79

40.1

Associated Gene:

Gene:

AGBL4

Ensembl Gene ID:

ENSAPLG00000007966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023859

23988524 - 24256547

268024

ENSAPLT00000043598

23988761 - 24205078

216318

ENSAPLT00000023179

23988524 - 24215523

227000

ENSAPLT00000037283

23988524 - 24205078

216555

ENSAPLT00000008261

23996693 - 24205078

208386

ENSAPLT00000036695

23988524 - 24256547

268024

ENSAPLT00000027053

23988524 - 24203767

215244

ENSAPLT00000046167

23988524 - 24251074

262551