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Intron Name: Anas_platyrhynchos_platyrhynchos_8_24327001_24330911_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24327001 - 24330911

Intron Length:

3911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AATAGACTAATG

Flanking Amino Acid:

SLTSQIKHCQRMFV*

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

87.9

0.85

0.6

81.4

30.6

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

40.1

-0.8

2.2

46.02

40.1

Associated Gene:

Gene:

BEND5

Ensembl Gene ID:

ENSAPLG00000008052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008354

24326988 - 24687390

360403

ENSAPLT00000030385

24326988 - 24358276

31289

ENSAPLT00000030178

24326988 - 24892482

565495