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Intron Name: Anas_platyrhynchos_platyrhynchos_8_24419266_24540082_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24419266 - 24540082

Intron Length:

120817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CCTTTTATAATT

Flanking Amino Acid:

FCRELLGLSVQRRQLDLLTI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

56.9

0.29

1.6

71.4

40.7

Associated Gene:

Gene:

BEND5

Ensembl Gene ID:

ENSAPLG00000008052

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030178

24326988 - 24892482

565495

ENSAPLT00000008354

24326988 - 24687390

360403